Gilbreth Maintenance Application Version Changes
As part of Gilbreth's upcoming maintenance, we will be upgrading the operating system from CentOS 7 to Rocky Linux 9 which requires us to rebuild the applications hosted on Gilbreth. As part of this application rebuild, we will be removing old and unused versions of our applications and upgrading many of them to newer versions. We have compiled a list of those affected software below.
If you have any questions about the upcoming maintenance, please reach out to us at rcac-help@purdue.edu.
| Application | Current Versions | New Versions |
|---|---|---|
| Abaqus | 2017, 2018, 2019, 2020, 2021, 2022 | 2023, 2024 |
| Alphafold | 2.1.1, 2.2.0, 2.3.0, 2.3.1, 2.3.2 | 2.3.2 |
| Amber | 16, 24 | 24 |
| Anaconda | 2024.02-py311 | Removed. *Note: The anaconda module has been replaced with the conda module * |
| Ansys | 19.2, 2019R3, 2020R1, 2021R2, 2022R1, 2023R1, 2023R2 | 2023R2, 2024R2 |
| Archivemount | 0.8.12 | 0.8.12, 0.9.1 |
| AWS-CLI | 2.4.15 | 2.24.5 |
| Boost | 1.79 | 1.79.0, 1.85.0 |
| BZip2 | 1.0.8 | 1.0.8 |
| Cactus | 2.2.3-gpu, 2.4.0-gpu | 2.2.3-gpu, 2.4.0-gpu |
| CDO | 1.9.5 | 1.9.5, 2.3.0 |
| Chroma | 2018-cuda9.0-ubuntu16.04-volta-openmpi, 2020.06, 2021.04 | 2021.04 |
| Cmake | 3.15.4, 3.20.6 | 3.26.5, 3.30.2 |
| Conda | 2024.09 | 2024.09 |
| Cuda | 8.0.61, 9.0.176, 10.0.130, 10.2.89, 11.0.3, 11.2.0, 11.7.0, 12.1.1 | 12.1.1, 12.6.0 |
| Cuda-quantum | 0.4.0, 0.8.0 | 0.8.0, 0.9.1 |
| Cudnn | cuda-8.0_6.0, cuda-8.0_7.1, cuda-9.0_7.3, cuda-9.0_7.4, cuda-10.0_7.5, cuda-10.2_8.0, cuda-11.0_8.0, cuda-11.2_8.1, cuda-11.7_8.6, cuda-12.1_8.9 | cuda-12.1_8.9, cuda-12_9.2 |
| Cuquantum-appliance | 23.03 | 23.03, 24.08 |
| Curl | 7.79.0 | 8.11.1 |
| Duckdb | 1.0.0 | 1.1.3 |
| Envi | 5.5.2 | Removed |
| ffmpeg | 4.2.1 | 6.1.1 |
| fftw | 3.3.10 | 3.3.10 |
| Gamess | 17.09-r2-libcchem | 17.09-r2-libcchem |
| Gaussian16 | A.03, B.01-gpu | Removed |
| Gaussview | 6.0.16 | Removed |
| gcc | 4.8.5,6.3.0,9.3.0,12.3 | 11.5, 13.3.0 |
| gdal | 2.4.2, 3.5.3-grib, 3.5.3 | 3.9.2 |
| geos | 3.7.2, 3.9.4 | 3.13.0 |
| gettext | 0.20.1 | 0.23.1 |
| gmake | 4.2.1 | 4.3 |
| gmp | 6.1.2 | 6.1.2, 6.3.0 |
| gmt | 5.4.4 | 5.4.4, 6.5.0 |
| gnuplot | 5.2.7 | 6.0.2 |
| grads | 2.2.1 | 2.2.1 |
| Gromacs | 2018.2, 2020.2, 2021, 2021.3, 2024.1 | 2024.3, NGC:2023.02 |
| gsl | 2.4 | 2.7.1 |
| Hadoop | 2.7.7 | Removed |
| hdf | 4.2.14 | 4.2.15 |
| hdf5 | 1.14.1 | 1.14.3 |
| Hyper-shell | 1.8.3, 2.0.2, 2.4.0, 2.5.1 | 2.5.2 |
| idl | 8.7 | 9.1 |
| impi | 2017.1.132, 2019.5.281 | 2021.12 |
| intel | 17.0.1.132, 19.0.5.281 | 2024.2.1 |
| Jax | 0.4.31 | 0.5.0 |
| Julia | v1.5.0, v2.4.2, 1.7.1, 1.8.5, 1.9.3 | 1.11.1, v2.4.2 |
| Jupyterhub | 2.0.0 | 5.2.1 |
| Lammps | 10Feb2021, 15Jun2020, 24Oct2018, 29Oct2020 | patch_15Jun2023, Aug292024 |
| libiconv | 1.16 | 1.17 |
| libtiff | 4.0.10 | 4.6.0 |
| libxml2 | 2.9.9 | 2.10.3 |
| Mathematica | 11.3, 12.1, 12.3, 13.1, 14.1 | 14.1, 14.2 |
| Matlab | R2017a, R2018a, R2019a, R2020a, R2022a, R2023a | R2024a |
| milc | quda0.8-patch4Oct2017 | quda1.1.0-November2022 |
| mpc | 1.1.0 | 1.3.1 |
| mpfr | 3.1.6 | 4.2.1 |
| namd | 2.13-multinode, 2.13-singlenode, 2.13, 3.0-alpha3-singlenode | 3.0 |
| ncl | 6.4.0 | 6.6.2 |
| nco | 4.6.7 | 5.2.4 |
| ncurses | 6.1 | 6.5 |
| netcdf-c | 4.5.0, 4.7.0, 4.9.2 | 4.9.2 |
| netcdf-cxx4 | 4.3.0, 4.3.1 | 4.3.1 |
| netcdf-fortran | 4.4.4, 4.5.2, 4.6.1 | 4.6.1 |
| netlib-lapack | 3.6.0, 3.8.0 | 3.11.0 |
| nvhpc | 20.7, 20.9, 20.11, 21.5, 21.9, 22.7, 23.5 | 23.5, 24.7 |
| Openblas | 0.2.20, 0.3.7, 0.3.21 | 0.3.21, 0.3.27 |
| Openmpi | 3.1.5-gpu-cuda10, 2.1.6-gpu-cuda11, 4.1.5-gpu-cuda11, 4.1.5-gpu-cuda12 | 4.1.6, 5.0.5 |
| Panoply | 4.11.0 | 5.0.5 |
| Parabricks | 4.0.0-1 | 4.4.0-1 |
| Paraview | 5.9.0 | 5.11.0 |
| proj | 5.2.0, 8.2.1 | 9.4.1 |
| protobuf | 3.0.2 | 25.6 |
| PyTorch | 20.02-py3, 20.03-py3, 20.06-py3, 20.11-py3, 20.12-py3, 21.06-py3, 21.09-py3 | 25.01 |
| qemu | 2.10.1 | Removed |
| qmcpack | 3.5.0 | 3.16.0 |
| qt | 5.12.5 | 5.15.15 |
| Quantum-Espresso | v6.6a1, v6.7, v7.1 | 7.3.1 |
| R | 3.6.1, 3.6.3, 4.0.0, 4.1.2, 4.2.2, 4.3.1 | 4.4.1 |
| Rapidsai | 0.12, 0.13, 0.14, 0.15, 0.16, 0.17, 21.06, 21.10 | 23.06 |
| Relion | 2.1.b1, 3.0.8, 3.1.0, 3.1.2, 3.1.3, 4.0.1, 5.0.0 | 5.0.0 |
| RStudio | 1.2.1335, 1.3.959, 2021.09, 2022.07, 2023.06 | 2024.12 |
| SAS | 9.4 | 9.4 |
| segalign | 0.1.2 | 0.1.2 |
| spark | 2.4.4 | Removed |
| sqlite | 3.30.1 | 3.46.0 |
| tar | 1.3.2 | 1.34 |
| tcl | 8.6.8 | 8.6.12 |
| TensorFlow | 20.02-tf1-py3, 20.02-tf2-py3, 20.03-tf1-py3, 20.03-tf2-py3, 20.06-tf1-py3, 20.06-tf2-py3, 20.11-tf1-py3, 20.11-tf2-py3, 20.12-tf1-py3, 20.12-tf2-py3, 21.06-tf1-py3, 21.06-tf2-py3, 21.09-tf1-py3, 21.09-tf2-py3 | 24.10-tf2-py3, 24.11-tf2-py3, 24.12-tf2-py3, 25.01-tf2-py3 |
| tecplot | 360-2017-R3 | 260-2017-R3, 360-2024-R1 |
| texlive | 20200406 | 20220321 |
| tk | 8.6.8 | 8.6.11 |
| torchani | 2021.04 | 2021.04 |
| totalview | 2017.0.12, 2018.2.6, 2019.1.4, 2021.4.10 | 2024.4 |
| ucx | 1.13.0 | 1.17.0 |
| udunits | 2.2.28 | 2.2.28 |
| valgrind | 3.13.0 | 3.23.0 |
| vlc | 3.0.9.2 | 3.0.21 |
| vmd | 1.9.3 | 1.9.3 |
| vscode | 1.56, 1.59 | 1.97.2 |
| xalt | 1.1.2 | 3.1.1 |
| xz | 5.2.4 | 5.6.4 |
| zlib | 1.2.11 | 1.2.11, 1.3.1 |