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The WiggleTools package allows genomewide data files to be manipulated as numerical functions, equipped with all the standard functional analysis operators (sum, product, product by a scalar, comparators), and derived statistics (mean, median, variance, stddev, t-test, Wilcoxon's rank sum test, etc).

Available Versions
Available Versions
Unspecified: 1.2.11

Winnowmap is a long-read mapping algorithm optimized for mapping ONT and PacBio reads to repetitive reference sequences.

Available Versions
Available Versions
Unspecified: 2.03

Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT).

Available Versions
Available Versions
Unspecified: 2.5

Available Versions
Available Versions
Anvil: 2.10.45
Bell: 1.1.2
Gilbreth: 1.1.2
Scholar: 1.1.2 2.7.1

The XCB util modules provides a number of libraries which sit on top of libxcb, the core X protocol library, and some of the extension libraries. These experimental libraries provide convenience functions and interfaces which make the raw X protocol more usable. Some of the libraries also provide client-side code which is not strictly part of the X protocol but which have traditionally been provided by Xlib.

Available Versions
Available Versions
Negishi: 0.4.0

The XCB util modules provides a number of libraries which sit on top of libxcb, the core X protocol library, and some of the extension libraries. These experimental libraries provide convenience functions and interfaces which make the raw X protocol more usable. Some of the libraries also provide client-side code which is not strictly part of the X protocol but which have traditionally been provided by Xlib.

Available Versions
Available Versions
Negishi: 0.4.0

The XCB util modules provides a number of libraries which sit on top of libxcb, the core X protocol library, and some of the extension libraries. These experimental libraries provide convenience functions and interfaces which make the raw X protocol more usable. Some of the libraries also provide client-side code which is not strictly part of the X protocol but which have traditionally been provided by Xlib.

Available Versions
Available Versions
Negishi: 0.3.9

The XCB util modules provides a number of libraries which sit on top of libxcb, the core X protocol library, and some of the extension libraries. These experimental libraries provide convenience functions and interfaces which make the raw X protocol more usable. Some of the libraries also provide client-side code which is not strictly part of the X protocol but which have traditionally been provided by Xlib.

Available Versions
Available Versions
Negishi: 0.4.1

XScreenSaver - X11 Screen Saver extension client library

Available Versions
Available Versions
Negishi: 1.2.2

XSEDE Common User Environment Variables for Anvil. Load this module to have XSEDE Common User Environment variables defined for your shell session or job on Anvil.

Available Versions
Available Versions
Anvil: 1.1

XZ Utils is free general-purpose data compression software with high compression ratio. XZ Utils were written for POSIX-like systems, but also work on some not-so-POSIX systems. XZ Utils are the successor to LZMA Utils.

Available Versions
Available Versions
Negishi: 5.2.7

A free, general-purpose, legally unencumbered lossless data-compression library.

Available Versions
Available Versions
Anvil: 1.2.11
Bell: 1.2.11
Gilbreth: 1.2.11 1.2.11-generic
Negishi: 1.2.13
Scholar: 1.2.11 1.2.11-generic

Zstandard, or zstd as short version, is a fast lossless compression algorithm, targeting real-time compression scenarios at zlib-level and better compression ratios. It's backed by a very fast entropy stage, provided by Huff0 and FSE library.

Available Versions
Available Versions
Unspecified: 1.4.3