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Containerized Bioinformatics Applications for HPC

This bioinformatics workshop will introduce the containerized bioinformatics computing resources provided by Purdue Rosen Center for Advanced Computing in ACCESS Anvil. Familiarity with the Linux/Unix command-line is recommended.

Schedule: The Events page will show the next scheduled session.

Topics overview:

  • Containerized bioinformatics applications on Anvil
  • Open OnDemand for GUI applications
  • Customized R containers for RNAseq and scRNAseq analysis
  • Customized Python containers supporting Jupyter
  • Batch jobs and interactive jobs

Lecture Recording: