aspera-connect
Link to section 'Introduction' of 'aspera-connect' Introduction
Aspera connect is software that allows download and upload data. The software includes a command line tool (ascp) that allows scripted data transfer.
Link to section 'Versions' of 'aspera-connect' Versions
- 4.2.6
Link to section 'Commands' of 'aspera-connect' Commands
- ascp
- ascp4
- asperaconnect
- asperaconnect.bin
- asperaconnect-nmh
- asperacrypt
- asunprotect
Link to section 'Module' of 'aspera-connect' Module
You can load the modules by:
module load biocontainers
module load aspera-connect
Link to section 'Example job' of 'aspera-connect' Example job
Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.
To run Abacas on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=abacas
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers aspera-connect
ascp -i ~/aspera.openssh -QT -l100m -k1 -d SRC DEST