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motus

Link to section 'Introduction' of 'motus' Introduction

The mOTU profiler is a computational tool that estimates relative taxonomic abundance of known and currently unknown microbial community members using metagenomic shotgun sequencing data.

Home page: https://github.com/motu-tool/mOTUs

Link to section 'Versions' of 'motus' Versions

  • 3.0.3

Link to section 'Commands' of 'motus' Commands

  • motus

Link to section 'Module' of 'motus' Module

You can load the modules by:

module load biocontainers
module load motus

Link to section 'Example job' of 'motus' Example job

Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.

To run motus on our clusters:

#!/bin/bash
#SBATCH -A myallocation     # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=motus
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out

module --force purge
ml biocontainers motus
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