tassel
Link to section 'Introduction' of 'tassel' Introduction
TASSEL is a software package used to evaluate traits associations, evolutionary patterns, and linkage disequilibrium.
Home page: https://www.maizegenetics.net/tassel
Link to section 'Versions' of 'tassel' Versions
- 5.0
Link to section 'Commands' of 'tassel' Commands
- run_pipeline.pl
- start_tassel.pl
- Tassel5
Link to section 'Module' of 'tassel' Module
You can load the modules by:
module load biocontainers
module load tassel
Link to section 'Example job' of 'tassel' Example job
Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.
To run tassel on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=tassel
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers tassel