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bayescan

Link to section 'Introduction' of 'bayescan' Introduction

BayeScan aims at identifying candidate loci under natural selection from genetic data, using differences in allele frequencies between populations.

For more information, please check its home page on http://cmpg.unibe.ch/software/BayeScan/.

Link to section 'Versions' of 'bayescan' Versions

  • 2.1

Link to section 'Commands' of 'bayescan' Commands

  • bayescan

Link to section 'Module' of 'bayescan' Module

You can load the modules by:

module load biocontainers
module load bayescan

Link to section 'Example job' of 'bayescan' Example job

Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.

To run bayescan on our clusters:

#!/bin/bash
#SBATCH -A myallocation     # Allocation name 
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=bayescan
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out

module --force purge
ml biocontainers bayescan
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