phipack
Link to section 'Introduction' of 'phipack' Introduction
PhiPack: PHI test and other tests of recombination
BioContainers: https://biocontainers.pro/tools/phipack
Home page: http://www.maths.otago.ac.nz/~dbryant/software.html
Link to section 'Versions' of 'phipack' Versions
- 1.1
Link to section 'Commands' of 'phipack' Commands
- Phi
- Profile
Link to section 'Module' of 'phipack' Module
You can load the modules by:
module load biocontainers
module load phipack
Link to section 'Example job' of 'phipack' Example job
Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.
To run phipack on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=phipack
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers phipack