clust
Link to section 'Introduction' of 'clust' Introduction
Clust is a fully automated method for identification of clusters (groups) of genes that are consistently co-expressed (well-correlated) in one or more heterogeneous datasets from one or multiple species.
BioContainers: https://biocontainers.pro/tools/clust
Home page: https://github.com/baselabujamous/clust
Link to section 'Versions' of 'clust' Versions
- 1.17.0
Link to section 'Commands' of 'clust' Commands
- clust
Link to section 'Module' of 'clust' Module
You can load the modules by:
module load biocontainers
module load clust
Link to section 'Example job' of 'clust' Example job
Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.
To run clust on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=clust
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers clust