ciri2
Link to section 'Introduction' of 'ciri2' Introduction
CIRI2: Circular RNA identification based on multiple seed matching
Home page: https://sourceforge.net/projects/ciri/files/CIRI2/
Link to section 'Versions' of 'ciri2' Versions
- 2.0.6
Link to section 'Commands' of 'ciri2' Commands
- CIRI2.pl
Link to section 'Module' of 'ciri2' Module
You can load the modules by:
module load biocontainers
module load ciri2
Link to section 'Example job' of 'ciri2' Example job
Using #!/bin/sh -l
as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash
instead.
To run ciri2 on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=ciri2
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers ciri2